Publications Christian Rinke
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Youssef, N.H., Rinke, C., Stepanauskas, R., Farag, I., Woyke, T., and Elshahed, M.S. (2014). Insights into the metabolism, lifestyle and putative evolutionary history of the novel archaeal phylum /`Diapherotrites/’. ISME J.
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Hedlund BP, Dodsworth JA, Murugapiran SK, Rinke C, Woyke T. 2014. Impact of single-cell genomics and metagenomics on the emerging view of extremophile "microbial dark matter". Extremophiles. DOI 10.1007/s00792-014-0664-7.
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Rinke C., J. Lee, N. Nath, D. Goudeau, B. Thompson, N. Poulton, E. Dmitrieff, R. Malmstrom, R. Stepanauskas, and T. Woyke, “Obtaining genomes from uncultivated environmental microorganisms using FACS–based single-cell genomics,” Nat. Protocols, vol. 9, no. 5, pp. 1038–1048, May 2014.
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Ivanova N. N., P. Schwientek, H. J. Tripp, C. Rinke, A. Pati, M. Huntemann, A. Visel, T. Woyke, N. C. Kyrpides, and E. M. Rubin, “Stop codon reassignments in the wild,” Science, vol. 344, no. 6186, pp. 909–913, May 2014.
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Wilson M.C., T. Mori, C. Ruckert, A. R. Uria, M. J. Helf, K. Takada, C. Gernert, U. A. E. Steffens, N. Heycke, S. Schmitt, C. Rinke, E. J. N. Helfrich, A. O. Brachmann, C. Gurgui, T. Wakimoto, M. Kracht, M. Crusemann, U. Hentschel, I. Abe, S. Matsunaga, J. Kalinowski, H. Takeyama, and J. Piel, “An environmental bacterial taxon with a large and distinct metabolic repertoire,” Nature, vol. 506, no. 7486, pp. 58–62, Feb. 2014.
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Rinke, C. , Schwientek, P., Sczyrba, A., Ivanova, N. N., Anderson, I. J., Cheng, J.-F., Darling, A., Malfatti, S., Swan, B. K., Gies, E. A., Dodsworth, J.A., Hedlund, B. P., Tsiamis, G., Sievert S. M., 9, Liu,W.-T., 10, Eisen, J. A., Hallam, S., Kyrpides, N. C., Stepanauskas, R. 5, Rubin, E. M., Hugenholtz, P. and Woyke T. (2013). Insights into the Phylogeny and Coding Potential of Microbial Dark Matter. Nature, doi:10.1038/nature12352
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Kamke, J., Alexander Sczyrba, Natalia Ivanova, Patrick Schwientek, Christian Rinke, Kostas Mavromatis, Tanja Woyke and Ute Hentschel1. 2013 Single-cell Genomics Reveals Complex Carbohydrate Degradation Patterns in Poribacterial Symbionts of Marine Sponges. The ISME Journal. doi: 10.1038/ismej.2013.111
Woyke T, Sczyrba A, Lee J, Rinke C, Tighe D, Clingenpeel S, Malmstrom R, Stepanauskas R, Cheng J-F (2011) Contamination-free single cell amplification. PLoS ONE 10:e26161.
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Rinke C, Lee W R (2009) A macro camera temperature logger array for deep-sea hydrothermal vent and benthic studies. Limnol. Oceanogr.: Methods 7, 2009, 527–534.
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Bayer C, Heindl N R, Rinke C, Lücker S, Joerg A. Ott J A, Bulgheresi S (2009) Molecular characterization of the symbionts associated with marine nematodes of the genus Robbea. Environmental Microbiology Reports 1(2): 136-144.
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Kloiber U, Pflugfelder B, Rinke C, Bright M (2009) Cell proliferation and growth in Zoothamnium niveum (Oligohymenophora, Peritrichida) – thiotrophic bacteria symbiosis. Symbiosis 47:1
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Rinke C, Lee W R (2009) Pathways, activities and thermal stability of anaerobic and aerobic enzymes in thermophilic vent paralvinellid worms. MEPS 382:99-112
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Rinke C, Schmitz-Esser S, Loy A, Horn M, Wagner M, Bright M (2009) High genetic similarity between two geographically distinct strains of the sulfur-oxidizing symbiont 'Candidatus Thiobios zoothamnicoli' FEMS Microbiol. Ecol. 67: 229-41.
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Rinke C, Lee R, Katz S & Bright M (2007) The effects of sulphide on growth and behaviour of the thiotrophic Zoothamnium niveum symbiosis. P. Roy. Soc. Lond. B 274: 2259–2269.
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Rinke C, Schmitz-Esser S, Stoecker K, Nussbaumer AD, Molnár DA, Vanura K, Wagner M, Horn M, Ott JA, Bright M (2006) “Candidatus Thiobios zoothamnicoli,” an Ectosymbiotic Bacterium Covering the Giant Marine Ciliate Zoothamnium niveum. Appl. Environ. Microbiol. Vol. 72, No. 3, p. 2014–2021
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